kspaceFirstOrder3D-OMP
1.1
The C++ implementation of the k-wave toolbox for the time-domain simulation of acoustic wave fields in 3D
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Class storing all parameters of the simulation. More...
#include <Parameters.h>
Public Types | |
enum | TSenosrMaskType { smt_index = 0, smt_corners = 1 } |
Sensor mask type (linear indices or cuboid corners). More... | |
Public Member Functions | |
virtual | ~TParameters () |
Destructor. | |
void | ParseCommandLine (int argc, char **argv) |
Parse command line. More... | |
void | ReadScalarsFromHDF5InputFile (THDF5_File &HDF5_InputFile) |
Read scalar values from the input HDF5 file. More... | |
void | SaveScalarsToHDF5File (THDF5_File &HDF5_OutputFile) |
Save scalars into the output HDF5 file. More... | |
TDimensionSizes | GetFullDimensionSizes () const |
Full dimension sizes of the simulation (real classes). | |
TDimensionSizes | GetReducedDimensionSizes () const |
Reduced dimension sizes of the simulation (complex classes). | |
size_t | Get_Nt () const |
Get Nt value. | |
size_t | Get_t_index () const |
Get simulation time step. | |
void | Set_t_index (const size_t new_t_index) |
Set simulation time step – should be used only when recovering from checkpoint. | |
void | Increment_t_index () |
Increment simulation time step. | |
float | Get_dt () const |
Get dt value. | |
float | Get_dx () const |
Get dx value. | |
float | Get_dy () const |
Get dy value. | |
float | Get_dz () const |
Get dz value. | |
float | Get_c_ref () const |
Get c_ref value. | |
float | Get_alpha_power () const |
Get alpha_power value. | |
size_t | Get_pml_x_size () const |
Get pml_x_size value. | |
size_t | Get_pml_y_size () const |
Get pml_y_size value. | |
size_t | Get_pml_z_size () const |
Get pml_z_size value. | |
float | Get_pml_x_alpha_size () const |
Get pml_x_alpha_size value. | |
float | Get_pml_y_alpha_size () const |
Get pml_y_alpha_size value. | |
float | Get_pml_z_alpha_size () const |
Get pml_z_alpha_size value. | |
size_t | Get_ux_source_flag () const |
Get ux_source_flag value. | |
size_t | Get_uy_source_flag () const |
Get uy_source_flag value. | |
size_t | Get_uz_source_flag () const |
Get uz_source_flag value. | |
size_t | Get_u_source_many () const |
Get u_source_many value. | |
size_t | Get_u_source_mode () const |
Get u_source_mode value. | |
size_t | Get_p_source_flag () const |
Get p_source_flag value. | |
size_t | Get_p0_source_flag () const |
Get p0_source_flag value. | |
size_t | Get_p_source_many () const |
Get p_source_many value. | |
size_t | Get_p_source_mode () const |
Get p_source_mode value. | |
size_t | Get_nonuniform_grid_flag () const |
Get nonuniform_grid_flag value. | |
size_t | Get_absorbing_flag () const |
Get absorbing_flag value. | |
size_t | Get_nonlinear_flag () const |
Get nonlinear_flag value. | |
size_t | Get_transducer_source_flag () const |
Get transducer_source_flag value. | |
TSenosrMaskType | Get_sensor_mask_type () const |
Get sensor mask type (linear or corners). | |
size_t | Get_sensor_mask_index_size () const |
Get sensor_mask_index_size value. | |
size_t | Get_sensor_mask_corners_size () const |
Get number of cubes in the mask. | |
size_t | Get_u_source_index_size () const |
Get u_source_index_size value. | |
size_t | Get_p_source_index_size () const |
Get p_source_index_size value. | |
size_t | Get_transducer_source_input_size () const |
Get transducer_source_input_size value. | |
bool | Get_alpha_coeff_scallar_flag () const |
Get alpha_coeff_scallar_flag value. | |
float & | Get_alpha_coeff_scallar () |
Get alpha_coeff_scallar value. | |
bool | Get_c0_scalar_flag () const |
Get c0_scalar_flag value. | |
float & | Get_c0_scalar () |
Get c0_scalar value. | |
float & | Get_absorb_eta_scalar () |
Get absorb_eta_scalar value. | |
float & | Get_absorb_tau_scalar () |
Get absorb_tau_scalar value. | |
bool | Get_BonA_scalar_flag () const |
Get BonA_scalar_flag value. | |
float & | Get_BonA_scalar () |
Get BonA_scalar value. | |
bool | Get_rho0_scalar_flag () const |
Get rho0_scalar_flag value. | |
float & | Get_rho0_scalar () |
Get rho0_scalar value. | |
float & | Get_rho0_sgx_scalar () |
Get rho0_sgx_scalar value. | |
float & | Get_rho0_sgy_scalar () |
Get rho0_sgy_scalar value. | |
float & | Get_rho0_sgz_scalar () |
Get rho0_sgz_scalar value. | |
string | GetInputFileName () const |
Get input file name. | |
string | GetOutputFileName () const |
Get output file name. | |
string | GetCheckpointFileName () const |
Get checkpoint filename. | |
size_t | GetCompressionLevel () const |
Get compression level. | |
size_t | GetNumberOfThreads () const |
Get number of threads. | |
size_t | GetVerboseInterval () const |
Get verbose interval. | |
size_t | GetStartTimeIndex () const |
Get start time index for sensor recording. | |
bool | IsCheckpointEnabled () const |
Is checkpoint enabled. | |
size_t | GetCheckpointInterval () const |
Get checkpoint interval. | |
bool | IsVersion () const |
Is –version specified at the command line? | |
bool | IsStore_p_raw () const |
Is -p or –p_raw specified at the command line? | |
bool | IsStore_p_rms () const |
Is –p_rms specified at the command line? | |
bool | IsStore_p_max () const |
Is –p_max specified at the command line? | |
bool | IsStore_p_min () const |
Is –p_min specified at the command line? | |
bool | IsStore_p_max_all () const |
Is –p_max_all specified at the command line? | |
bool | IsStore_p_min_all () const |
Is –p_min_all specified at the command line? | |
bool | IsStore_p_final () const |
Is –p_final specified at the command line? | |
bool | IsStore_u_raw () const |
Is -u or –u_raw specified at the command line? | |
bool | IsStore_u_non_staggered_raw () const |
Is –u_non_staggered_raw set? | |
bool | IsStore_u_rms () const |
Is –u_raw specified at the command line? | |
bool | IsStore_u_max () const |
Is –u_max specified at the command line? | |
bool | IsStore_u_min () const |
Is –u_min specified at the command line? | |
bool | IsStore_u_max_all () const |
Is –u_max_all specified at the command line. | |
bool | IsStore_u_min_all () const |
Is –u_min_all specified at the command line? | |
bool | IsStore_u_final () const |
Is –u_final specified at the command line. | |
bool | IsCopySensorMask () const |
is –copy_mask set? | |
Static Public Member Functions | |
static TParameters * | GetInstance () |
Get instance of the singleton class. More... | |
Public Attributes | |
THDF5_File | HDF5_InputFile |
Handle to the input HDF5 file. | |
THDF5_File | HDF5_OutputFile |
Handle to the output HDF5 file. | |
THDF5_File | HDF5_CheckpointFile |
Handle to the checkpoint HDF5 file. | |
THDF5_FileHeader | HDF5_FileHeader |
Handle to file header. | |
Protected Member Functions | |
TParameters () | |
Constructor not allowed for public. More... | |
TParameters (const TParameters &src) | |
Copy constructor not allowed for public. | |
TParameters & | operator= (const TParameters &src) |
Operator = not allowed for public. | |
Protected Attributes | |
TCommandLineParameters | CommandLinesParameters |
Class with commandline parameters. | |
size_t | Nt |
Nt value. | |
size_t | t_index |
actual time index (time step of the simulation). | |
float | dt |
dt value. | |
float | dx |
dx value. | |
float | dy |
dy value. | |
float | dz |
dz value. | |
float | c_ref |
c_ref value. | |
float | alpha_power |
alpha_power value. | |
TDimensionSizes | FullDimensionSizes |
Full 3D dimension sizes. | |
TDimensionSizes | ReducedDimensionSizes |
Reduced 3D dimension sizes. | |
TSenosrMaskType | sensor_mask_type |
sensor mask type (0 = index, 1 = corners). | |
size_t | sensor_mask_ind_size |
sensor_mask_ind_size value. | |
size_t | sensor_mask_corners_size |
sensor_mask_corners_size - how many cuboids is in the mask.. | |
size_t | u_source_index_size |
u_source_index_size value. | |
size_t | p_source_index_size |
p_source_index_size value. | |
size_t | transducer_source_input_size |
transducer_source_input_size value. | |
size_t | ux_source_flag |
ux_source_flag value. | |
size_t | uy_source_flag |
uy_source_flag value. | |
size_t | uz_source_flag |
uz_source_flag value. | |
size_t | p_source_flag |
p_source_flag value. | |
size_t | p0_source_flag |
p0_source_flag value. | |
size_t | transducer_source_flag |
transducer_source_flag value. | |
size_t | u_source_many |
u_source_many value. | |
size_t | u_source_mode |
u_source_mode value. | |
size_t | p_source_mode |
p_source_mode value. | |
size_t | p_source_many |
p_source_many value. | |
size_t | nonuniform_grid_flag |
nonuniform_grid_flag value. | |
size_t | absorbing_flag |
absorbing_flag value. | |
size_t | nonlinear_flag |
nonlinear_flag value. | |
size_t | pml_x_size |
pml_x_size value. | |
size_t | pml_y_size |
pml_y_size value. | |
size_t | pml_z_size |
pml_z_size value. | |
float | pml_x_alpha |
pml_x_alpha value. | |
float | pml_y_alpha |
pml_y_alpha value. | |
float | pml_z_alpha |
pml_z_alpha value. | |
bool | alpha_coeff_scalar_flag |
alpha_coeff_scallar_flag value. | |
float | alpha_coeff_scalar |
alpha_coeff_scallar value. | |
bool | c0_scalar_flag |
c0_scalar_flag value. | |
float | c0_scalar |
c0_scalar value. | |
float | absorb_eta_scalar |
absorb_eta_scalar value. | |
float | absorb_tau_scalar |
absorb_tau_scalar value. | |
bool | BonA_scalar_flag |
BonA_scalar_flag value. | |
float | BonA_scalar |
BonA_scalar value. | |
bool | rho0_scalar_flag |
rho0_scalar_flag value. | |
float | rho0_scalar |
rho0_scalar value. | |
float | rho0_sgx_scalar |
rho0_sgx_scalar value. | |
float | rho0_sgy_scalar |
rho0_sgy_scalar value. | |
float | rho0_sgz_scalar |
rho0_sgz_scalar value. | |
Static Protected Attributes | |
static bool | ParametersInstanceFlag = false |
singleton flag. | |
static TParameters * | ParametersSingleInstance = NULL |
singleton instance. | |
Private Member Functions | |
void | PrintUsageAndExit () |
Print usage and exit. More... | |
Class storing all parameters of the simulation.
Definition at line 51 of file Parameters.h.
Sensor mask type (linear indices or cuboid corners).
Definition at line 60 of file Parameters.h.
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protected |
Constructor.
Definition at line 450 of file Parameters.cpp.
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static |
Get instance of singleton class.
Definition at line 74 of file Parameters.cpp.
void TParameters::ParseCommandLine | ( | int | argc, |
char ** | argv | ||
) |
Parse command line.
[in] | argc | |
[in] | argv |
Definition at line 94 of file Parameters.cpp.
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private |
Print usage end exit.
Definition at line 484 of file Parameters.cpp.
void TParameters::ReadScalarsFromHDF5InputFile | ( | THDF5_File & | HDF5_InputFile | ) |
Read scalar values from the input HDF5 file.
[in] | HDF5_InputFile | - Handle to an opened input file. |
ios:failure | if the file cannot be open or is of a wrong type or version. |
Definition at line 126 of file Parameters.cpp.
void TParameters::SaveScalarsToHDF5File | ( | THDF5_File & | HDF5_OutputFile | ) |
Save scalars into the output HDF5 file.
[in] | HDF5_OutputFile | - Handle to an opened output file where to store |
Definition at line 362 of file Parameters.cpp.